BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019H12LP1|AL427547
(828 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1674 379 e-105
>3x_Contig1674
Length = 12281
Score = 379 bits (187), Expect = e-105
Identities = 207/217 (95%)
Strand = Plus / Plus
Query: 612 acacaaggggaaaccacgggaggggcaacggctagtgactggaacgttttkgcaaatacc 671
||||||||| ||||||| |||| ||||||||||||||||||||||||| |||||||||
Sbjct: 6619 acacaagggtaaaccactttagggtcaacggctagtgactggaacgttttggcaaatacc 6678
Query: 672 tgctttgtaaaattagaattaactagaatagtatctgckacacccatggkaaattgttcc 731
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 6679 tgctttgtaaaattagaattaactagaatagtatctgctacacccatggtaaattgttcc 6738
Query: 732 aatatgtcaaacggkattctatacagtttcttcaataagccatcccgcctggcgagcaat 791
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6739 aatatgtcaaacggtattctatacagtttcttcaataagccatcccgcctggcgagcaat 6798
Query: 792 tgatccgggaaakggcaataaaacaacacttttgagt 828
|||||||||||| ||||||||||||||||||||||||
Sbjct: 6799 tgatccgggaaatggcaataaaacaacacttttgagt 6835
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2274
Number of Sequences: 1807
Number of extensions: 2274
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 828
length of database: 10,358,551
effective HSP length: 16
effective length of query: 812
effective length of database: 10,329,639
effective search space: 8387666868
effective search space used: 8387666868
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)